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Species belonging to selected taxon:
Brassica rapa
ABOUT THIS RECORD
ID:
MNEST046430
species:
Brassica rapa
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Brassica rapa
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTGCTCTTTCTGTCA
mismatches:
1
bulges:
2
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
ACAAAAGTAAATTGCATATGTTGCATTTGCTTCTCTTGCGT
GCTCACTGCTCTTTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((
.(((((((((((.(((.....)))))))))))...))).))
))))))).))).))))))).
SIMILARITIES
miRBase
bna-MIR156a
:
3e-31
PMRD
bna-miR156a
:
3e-31
microPC
miR156
:
9e-41
UniProt
no hits
RFAM
mir-156: 2e-23
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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